#rstats

Matt Dancho (Business Science) (@mdancho84; 292/42): This used to be me when I was first learning linear regression. 😂

But here’s what’s changed for me. #rstats https://t.co/KKDC53Ut5y ↪

blogdown

R-bloggers (@Rbloggers; 13/3): Creating your own short URLs with blogdown {https://t.co/sYxFrnqFBm} #rstats #DataScience ↪

Kristof Dorau (@DorauKristof; 6/2): Do you want to measure, visualize, correct, and interpret #redoxpotentials in #soil? I have put down ressources on my personal website (created with #blogdown using #RStats 🥳)

https://t.co/Y17r066Xyv 👈 https://t.co/ixytHDGyuQ ↪

Jacob Long (@jacobandrewlong; 2/2): Have any of my fellow technically inclined academics gone with that Hugo academic theme (now called “Wowchemy” 🫥) and then greatly regretted it? It gets frequent breaking changes and now seems completely unsupported for use with #rstats blogdown… ↪

Denzil Ferreira - Tech, Dev, Science (@denzilferreira; 2/0): @eddiejaoude @schmelto2 Yep :) GitHub + Blogdown = personal notebook (e.g. https://t.co/bKYQDFG8yL) ↪

Federico Tiberti (@fedetiberti; 1/0): @__microdancing Cuando sale una empiezan a salir todas. La semana pasada me pasó con blogdown. ↪

tidyverse tweets (@tidyversetweets; 0/1): (Blogdown) R Markdown Blog Post Doesn’t Work #tidyverse #rstats https://t.co/muvX2tZnbv ↪

bookdown

R Markdown (@rmarkdown; 723/181): Read for free “R Graphics Cookbook, 2nd edition” by @winston_chang - a hands-on guide with more than 150 recipes to help you quickly create high-quality diagrams.

https://t.co/0A0L9OZbmg

#rstats #bookdown #rmarkdown #dataviz https://t.co/DEVbcB2ht9 ↪

Maria Tackett (@MT_statistics; 593/90): Had fun teaching a new course on generalized linear models this semester!
🔗 https://t.co/q60xdPLrfl

Lectures and HW were based on Beyond Multiple Linear Regression
🔗 https://t.co/JZajKFOU0r https://t.co/YsIcMOgnw9 ↪

R for the Rest of Us (@rfortherest; 206/44): The {bookdown} package is a great way to publish an #rstats book online. It’s what I’m using to make R Without Statistics.

Here’s a thread with step-by-step video instructions to help you get started with {bookdown}.

Prefer a blog post? Check out https://t.co/QByzndD2CS. https://t.co/46c7BlekLy ↪

Andy MacLachlan (@andymaclachlan; 132/27): 🚨 The @CASAUCL #GIS module resources by me and @adam_dennett have been published in @JOSE_TheOJ. This has been a few years in the making starting with writing GIS practicals in R > tidyversifying it > bookdown(ing) it🚨 #gischat https://t.co/QOhcLiHXVe ↪

R Markdown (@rmarkdown; 59/17): Data Analysis in Medicine and Health using R
https://t.co/MOs6yjXCHT

#rmarkdown #bookdown #RStats #dataanalysis ↪

心理的に柔軟なクジラ (@matsuchiy; 50/10): Rによる再現可能な医学研究
https://t.co/qzDNwRCYmU
インストールからデータラングリング，視覚化，回帰，Rマークダウンに至るまで，再現可能性に関連して幅広く解説。再現可能性の第一歩は前処理にexcel使わないこと ↪

Jonathan DePierro PhD (@jon_m_depierro; 20/0): @CDelawalla Well I still can’t get over this work of genius: https://t.co/Z2iNXxE7hd ↪

David Keyes (@dgkeyes; 16/5): Ignoring the fact that I posted the same video twice, this thread should be useful for anyone who wants to learn how to get started with {bookdown}. #rstats https://t.co/QpdyuI7OV2 ↪

Clemens Brunner (@cbrnr_; 13/1): @SachaEpskamp I disagree, especially because you can convert an .Rmd to a regular .R script using https://t.co/9qDUM5EoaJ. But each project is different, and I’m using both variants all the time.

Your points apply to Jupyter notebooks though IMO. ↪

R for the Rest of Us (@rfortherest; 9/3): Want to learn to make bookdown projects but confused about where to start? I struggled putting together R Without Statistics so I’ve written up the steps to help you avoid the same pain.

🔗 https://t.co/QByzndlrLk https://t.co/OpmGr52XKv ↪

Pawan Jangra (@pawanjangra1198; 8/4): Big Book of R https://t.co/SjrSFl72xC #rmarkdown #bookdown
#RStats #ggplot2 #TidyTuesday @OscarBaruffa ↪

Peter Higgins (@ibddoctor; 8/0): @Jonathansegal85 @hanwal9 @AlaaEl_Hussuna Hopefully this is a helpful resource https://t.co/H6KiwJDfCd ↪

Samer Mouksassi (@POPPKPD; 7/0): @daattali Inception shiny in a shiny in a shiny…. https://t.co/rFITLUsHzl ↪

Yingying (@learningbioinfo; 6/4): Chapter 10 Trajectory Analysis | Advanced Single-Cell Analysis with Bioconductor https://t.co/ZRimBz2ygr #rmarkdown #bookdown ↪

Stephen Holzman (@StephenHolz; 5/0): Really cool free and open source math textbook for the timeline: Introduction to Econometrics with R. A companion to the popular Introduction to Econometrics by Stock and Watson. https://t.co/Z8BT4zmYbY https://t.co/zSDcappf3q ↪

Peter Higgins (@ibddoctor; 4/2): @ebtapper Along with the original {blockrand}. An explanation and some examples of how to use these can be found here: https://t.co/QKlBhYpXMS ↪

Andy Field (@ProfAndyField; 4/1): @garaymariaa @Oliver_S_Curry @jamovistats I’d add a shout out to https://t.co/QFJi3riEkq ↪

Lisa DeBruine 🏳️‍🌈 (@LisaDeBruine; 4/1): One of the things that is going to stop me from converting all my bookdown books to #quarto is the lack of a df_print option. Does anyone know how to add knit hooks to do this?

https://t.co/xKD5xSRzW7 ↪

Jacob Kaplan (@JacobKaplanCrim; 3/1): @stone_prof @wpstickle Also available as a bookdown book here https://t.co/2AfurP0hCO ↪

Lisa DeBruine 🏳️‍🌈 (@LisaDeBruine; 3/1): I’m trying to convert a book to #quarto, but I can’t figure out how to include a custom javascript file. I used to do this with:

bookdown::bs4_book:
includes:
after_body: script.js

But it doesn’t seem to work for quarto and searching https://t.co/acNRI01NQF isn’t helping. ↪

Justin Nix (@jnixy; 3/0): @BCaralin I use @xieyihui’s -xaringan- package in R. Here’s a primer. Happy to walk through it with you if you’re interested in giving it a try!

https://t.co/bA8z4hzfvo ↪

tipsder (@tipsder; 2/3): ¡Data Science con #R!
Libro, en español, con una aproximación al uso de algoritmos de predicción con R.
https://t.co/TpzhTpd3sJ
#RStats
#DataScientist
#data
#dataviz
#Datavisualization
#RStatsES https://t.co/cBa2JRPHmK ↪

Thiago Gonçalves-Souza (@thiagotoyoyo; 2/0): @fmsilva1984 @DiogoProvete @mauriciovancine @paternogb @LET_IT_BE_news Oi Fernanda. Vamos marcar o lançamento para Maio. Livro está pronto. Estamos nos organizando para divulgar o dia do lançamento e todo material (bookdown, ebook e livro físico) ↪

🇲🇽 Leonardo Collado-Torres (@lcolladotor; 2/0): Using the data from @ajprice20 et al https://t.co/a3YEjP3yYt we show some examples of what you can do with these analysis-friendly objects

Think of it as a vignette. Also please check the documentation website built with #bookdown

https://t.co/3v54iwO9P0 https://t.co/TMtkw4TyTx ↪

Lisa DeBruine 🏳️‍🌈 (@LisaDeBruine; 2/0): @delaBJL @thomas_mock Yup, that was it! The bookdown version of this took a file path. ↪

Lisa DeBruine 🏳️‍🌈 (@LisaDeBruine; 2/0): @camartinezbu It’s pretty much the same as a bookdown site. You can create a new quarto book from the New Projects menu in RStudio to get a working demo and edit that. This is a really good guide. https://t.co/fdxyotTS0g ↪

Solomon Kurz (@SolomonKurz; 2/0): @o_guest @JamesSteeleII @ExPhysStudent @arthur_alb1 @f2harrell @hemanth_kanak @OSFramework @ZENODO_ORG I know how to get DOIs from zenodo for my bookdown-based ebooks. But I was under the impression that only worked at the GitHub repository level. Do you have experience making the zeondo approach work for different subfolders within a GitHub repo? ↪

Tony Hirst (@psychemedia; 2/0): Handy thread on bookdown vs. quarto

https://t.co/2pG5Yov10p ↪

#rstats 🤖 (@rstatsvideo; 1/1): 📺 New #rstatsvideo: How to get started with the bookdown package
▶ R for the Rest of Us (@rfortherest)
#rstats
🔗 https://t.co/njgFS0WcMb ↪

tidyverse tweets (@tidyversetweets; 1/1): Different Rmarkdown to PDF compiler behavior with RMarkown and Bookdown #tidyverse #rstats https://t.co/5Pw3cFIdfU ↪

Neeldhara (@neeldhara; 1/0): @PhilChodrow @quarto_pub Wow, Quarto looks really promising! I tried bookdown for a bit but it somehow didn’t stick, will probably take a closer look at Quarto soon.

Being able to target multiple formats simultaneously from one source has been on my wishlist forever, so… :) https://t.co/OR0XoPWZGY ↪

yaniv brandvain (@yanivbrandvain; 1/0): @pleunipennings looks AMAMZING! Is it cool if i steal these and put them in my intro biostats bookdown? ↪

yaniv brandvain (@yanivbrandvain; 1/0): @aylwyn_scally like many https://t.co/ofSRFFh5nD my comprehension drops when reading online documents & interactivity is another distraction

hypocritically I assign my bookdown text in class – i think the saving them $100 dollars + my control over the text is worth it -but i worry ↪

R for the Rest of Us (@rfortherest; 1/0): You probably don’t want your users to read the raw HTML that makes up a bookdown book. To enable them to see your book, we’ll need to host our HTML files somewhere. My favorite service for doing this is @netlify. ↪

R for the Rest of Us (@rfortherest; 1/0): Here’s how to post your bookdown project as a GitHub repository. https://t.co/V6H9ncyctQ ↪

Lisa DeBruine 🏳️‍🌈 (@LisaDeBruine; 1/0): @melisadigiacomo It’s really not much different from RMarkdown. The structure of the yaml header is a little different and there’s a nicer way to specify code chunk options (but the old way still works). The book version has a lot of nice features that were harder to implement in bookdown. ↪

Alex Lalejini (@amlalejini; 1/0): @LuisZaman @AFredston I love love love using r markdown + bookdown + github pages to turn all of my supplemental material into an ebook e.g., https://t.co/1Neng3KNIb

Wrote a guide here: https://t.co/1DHBXib7oU ↪

R for the Rest of Us (@rfortherest; 0/1): I hope that helps you to get started with bookdown! Don’t forget that you can find this same content as a blog post (https://t.co/QByzndD2CS). Thanks for sharing! https://t.co/xlM0SYjOat ↪

tidyverse tweets (@tidyversetweets; 0/1): Issues with figures when rendering rmarkdown/bookdown to pdf #tidyverse #rstats https://t.co/SvKhoRkt21 ↪

Tony Hirst (@psychemedia; 0/1): Could be handy until there’s an official converter, notes of converting from bookdown/Rmd to to quarto/qmd https://t.co/g4kuN1jAdw ↪

knitr

R Markdown (@rmarkdown; 65/13): Write your dissertation in #Rmarkdown - Using Rmarkdown to create complex pdf documents

https://t.co/rvwDXzFnyt

@our_codingclub @citedrive #rstats #knitr #texlatex https://t.co/nq4YmovbLc ↪

Carson Sievert (@cpsievert; 14/2): @nicolaskruchten @FILWD Also: plyr (dplyr), reshape (tidyr), knitr (rmarkdown), plotly (for R), trelliscope, jsonlite, opencpu, and probably lots of other #rstats packages ↪

Abdur Rohman (@rohmanoabdur; 5/0): @SachaEpskamp @adamjnafa @rstatstweet knitr::purl() can reproduce the code from .Rmd files and store it in a .R file. No need to copy-paste to reproduce the code. ↪

Stephen Eglen (@StephenEglen; 2/0): @LisaDeBruine @SachaEpskamp agree; knitr’s ability to read named chunks of code from .R files is great in this respect.

BTW Lisa, very much enjoying your tweets re: quarto. Am not yet convinced if I should switch… ↪

Jeremy Leipzig 🇺🇦 (@jermdemo; 2/0): @Lluis_Revilla @KevinBlighe yes but honestly my knitr scripts are now basically full of weird sentinel flags. They might as well be using GOTO. ↪

Lisa DeBruine 🏳️‍🌈 (@LisaDeBruine; 2/0): I figured it out! (By reading the documentation @xieyihui wrote at https://t.co/xHzr9LbZmB; who’d have guessed?)

I hadn’t called registerS3method() for data.frame. The gist is updated and this works exactly like I want now to add a customisable df_print-like option to #quarto. ↪

MFTR (@QCProfessor; 1/1): @DataAugmented Furthermore LyX makes it possible to write and compile R code by Knitr. This is great and very useful for scientific text #RStats ↪

Garrick Aden-Buie (@grrrck; 1/0): @nithinnithu_m Thanks Nithin! And good news… {epoxy} will work in Quarto, too!

({epoxy} is really a {knitr} extension, and Quarto, like {rmarkdown}, uses {knitr} as the R-based computation engine) ↪

Mateusz Sienkan ⚛️⚡🌍🌳🧬 (@s21n; 1/0): @daattali knitr::include_url() and knitr::include_app()? ↪

Lisa DeBruine 🏳️‍🌈 (@LisaDeBruine; 1/0): Similarly, if you want the equavalent to df_print: kable

library(knitr)

knit_print.data.frame <- function (x, options, …) {
knitr::kable(x) |> knitr::knit_print()
}

registerS3method(“knit_print”, “data.frame”, knit_print.data.frame) ↪

Stas Kolenikov (@StatStas; 1/0): Watching knitr fail with files/my_markdown_name_with_all_params file not found: The more informative the project directors/project managers are with their directory names, the less informative the analysts’ file names would have to be before you hit the freaking 260 characters li ↪

Beatriz Milz (@BeaMilz; 1/0): @jjesusfilho @quarto_pub @AIinclusive usar python nos chunks foi mais fluido nas minhas tentativas com quarto comparado com rmarkdown; organização melhor das opções de chunk (mas implementaram isso no knitr então vai funcionar tbm no rmarkdown); 3/n ↪

tinytex

Izabel Flores 🏁 (@Iza_Flores_; 8/0): Q inferno d LaTeX q não funfa no PC quero fazer meus relatórios afff Tinytex te odeio ↪

Luiz Mario (@luiz_marioags; 7/0): @Iza_Flores_ Reject Tinytex, embrace Overleaf ↪

Izabel Flores 🏁 (@Iza_Flores_; 2/0): Eu nao atualizei os pacotes 🤓
Amo Tinytex dnovo ↪

Izabel Flores 🏁 (@Iza_Flores_; 2/0): @luiz_marioags Hahah
Amo Overleaf 😍
Uso o Tinytex só no R mesmo ↪

Lisa DeBruine 🏳️‍🌈 (@LisaDeBruine; 2/0): @lakens This one is a very “me” problem, not quarto. I haven’t upgraded the OS on the laptop I use for web development since 2018 because I hate having to set up a tomcat server. I also need to upgrade because problems with SSL mean I can’t update latex with tinytex, so can’t knit PDFs. ↪

xaringan

Beatriz Milz (@BeaMilz; 71/13): I’m developing a presentation for @seruff_ using @quarto_pub presentations.
I started to implement a similar theme as the xaringan @RLadiesGlobal theme made by @apreshill !
If anyone wants to help to improve it, It would be awesome 💜 #rladies #RStats
https://t.co/xps1v49Ku4 https://t.co/sK9d3X3unE ↪

Beatriz Milz (@BeaMilz; 68/11): I asked for help with @quarto_pub on GitHub, and thanks to @chrisderv and Lucio, the Quarto slides are looking much more alike the theme that @apreshill created for @RLadiesGlobal in xaringan!
If anyone wants to use them, feel free to see the code here:
https://t.co/Dvs7yubOJX https://t.co/9B4Acvd362 https://t.co/qs6AmynjUt ↪

Shannon Pileggi (@PipingHotData; 10/6): am i making this problem harder than it needs to be?

👀seeking help with #RStats {xaringan} & {flair} 💅 & regex 😵‍💫

suggestions are much appreciated! 🙏

https://t.co/pTE6WsTok5 ↪

John Paul Helveston (@JohnHelveston; 1/0): @stelifanie xaringan ↪

Arthur Bazolli (@baarthur0; 1/0): @stelifanie I like xaringan (R) because it allows me to plot dynamic maps (e.g. tmap), I wouldn’t be able to make this with ppt. ↪

Mike LeGower (@mlegower; 1/0): @AprilBurrage What about using some flavor of markdown? I have switched to Rmarkdown/xaringan for all of my teaching and, while it’s still markup and not WYSIWYG, I find it easier than Latex/Beamer. ↪

Yisu Zhou (@makzhou; 1/0): @xieyihui maybe integrate this into the next version of Xaringan? https://t.co/6W0Hk8x8CA ↪

Sylvain Lapoix (@SylvainLapoix; 0/5): I’m a compulsive #Xaringan user (even evangelist as far as @datactivi_st goes) but in many situations we’re ask to provide prez as #PPTX.

I looked it up but : apart from printing in PDF & using clumsy online converters, what can I do ?

Please #RStats folks, save my sanity ! ↪

tidyverse tweets (@tidyversetweets; 0/2): Include slide in Xaringan presentation if condition based on parameter is true #tidyverse #rstats https://t.co/w10JXL4BMp ↪

tidyverse tweets (@tidyversetweets; 0/1): xaringan flair character strings with underscores #tidyverse #rstats https://t.co/eMtwOoyQJ4 ↪

Adolfo Álvarez 🌳 (@adolfoalvarez; 0/1): This, but Xaringan slides #rstats https://t.co/Q6T9YO3pvB ↪